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| Anaran-toerana | Anaram-java-maniry ara-tsiansa | Anarana ao amin' ny Baiboly | Anaram-bosotra | Anaran' orinasa, sns. |
| Anaran' olona malaza | Anaram-biby ara-tsiansa | Anaran' olona ao amin' ny angano | Anarana indrana |
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| Anarana ara-tsiansa | Anarana malagasy |
| Saba comorensis | vandribanga |
| Sabicea acuminata | sevafohy, voasaiva |
| Saccharum officinale | fary |
| Sacciolepis africana | tsimparifary, tsiparifary |
| Sakoanala madagascariensis | sakoala, sakoanala |
| Salacia calypso | rehe |
| Saldinia mandracensis | tsialahatra, voamasondrenikely |
| Salicornia pachystachya | tombotsamaka |
| Salix babylonica var. | hazomalahelo |
| Salvadora angustifolia | sasavy, tanisy, tsingilo |
| Salvadoropsis arenicola | fonindrevo |
| Salvia coccinea | afolava, sangasanga, sangasanganandevolahy |
| Salvinia hastata | manotona |
| Samadera indica | afatraiña, bemafaitra, bifetry, farafaka, fatraina, fatrain-drazana, mangafoky, menavoiny, samandora, simaroba |
| Sanicula europaea var. | trakavolanala |
| Santalum album | mazozana, sandaly |
| Sapindus trifoliatus | savonihazo, savony |
| Sapium melanostictum | taimpapango |
| Sarcobotrya strigosa | kijanambalala, tombokanjeva, tsiboko, tsikobo, tsikobona, voankazonikaladala, voavoananakova |
| Sarcolaena codonochlamy | elana |
| Sarcostemma decorsei | trihimadinika |
| Satyrium perrieri | tsipelandahy |
| Savia bojeriana | hazomainty |
| Scaevola koenigii | bararaka, litsoa |
| Schefflera bojeri | alomanaka |
| Schismatoclada concinna | harahaitra, mahalonify |
| Schizachyrium brevifolium | ahitsorohitra |
| Schizaea pectinata | tadidibozaka |
| Schizolaena cauliflora | arina, fotona, tsiarinarina, vandroza |
| Schizophyllum commune | holapary, holatrahazo, nonohazo, olapary, olatrahazo |
| Scirpus corymbosus | farana, forombole, forona, hazondrano, mahapy, mangibary, mita, navindasy, ravindahasa, sabotraka |
| Scleria boivinii | dity |
| Scolopia erythrocarpa | voatronakala |
| Scutia myrtina | fanalaloza, sety |
| Sebaea brachyphylla | tsakomantalahy |
| Secamone cristata | hazomainty |
| Secamonopsis madagascariensis | angalora, langalora, vahimainty |
| Sechium edule | sosety, sosoty |
| Securinega antsingyensis | anatsiko, vatoa |
| Selaginella fissidentoides | tanantrandraka |
| Selago muralis | faladiantsokina, haninjatovo, kalangita, manahaha, mavokely, sangararaka |
| Senebiera didyma | anantsingita, anantsingitantsoavaly, tsingita |
| Senecio acetosaefolius | mangity |
| Sesamum indicum | maho, solikazo, voahazo, voaho, voamaho |
| Sesbania bispinosa | katsakatsa |
| Setaria bathiei | kiahipody |
| Seyrigia gracilis | bambola |
| Sida acuta | tsindahoro |
| Sideroxylon beguei | hazotsiriana, kangy, mangobary, nantoboka, natotendrokazo, tamborokoko, tendrokazo, tendrotazo |
| Sigesbeckia abyssinica | ditinangatra, kiravita, satrikoazamaratra |
| Sindroa longisquama | sindroa |
| Siphomeris lingun | tarokazo |
| Smilax kraussiana | avaotra, avetro, aviotra, avoatra, fandrikibilisy, fandrikibodisy, havaotra, roidambo |
| Smithia chamaecrista | bosoa, fanivamena, ivanivana, sorindrano, sorindrina, vanina |
| Solanum aphananthum | ranenda, ranendo |
| Sonchus gigas subsp. | anamboraka |
| Sonneratia alba | farafaka, farafata, songery, tsongery, vahombavy |
| Sophora tomentosa | antsotromorona, antsotsimovona, firitsoka, fotsiavadikaranto, tsipolahina |
| Sopubia madagascariensis | marotonona |
| Sorghastrum bipennatum | varinakanga |
| Sorghum brevicarinatum | bakaka |
| Sorindeia madagascariensis | sorindrana, sorondriana, tsirondrano, tsirondro, tsorindry, voahonda, voasindriry, voatsirindra, vonontandraka |
| Sparmannia discolor var. | afotrakanga |
| Sparrmannia discolor | hafotrakanga, hafotsokina, kihafotsafotsa, tsivolo |
| Spathodea campanulata | hazofody |
| Spermacoce ocymoides | ambotonona |
| Sphedamnocarpus dubardii | vahimavo |
| Sphenomeris melleri | ampangaboboka |
| Spilanthes acmella | ahimafana, felimafana, kimalaho, kimalaholahy, kimalao, kimotodoha, mangovitra, menavony, sarinanamalao |
| Spinacia oleracea | anamamimbazaha |
| Spirospermum penduliflorum | amborasaha, karafarafito, lavaravina, oditolaka, telotritry |
| Spondias dulcis | sakoa |
| Sporobolus africanus | horomainty, horompotsy |
| Stachys brachiata | ahitsitry |
| Stachytarpheta australis | faiboha, feboha |
| Stadmannia acuminata | somotrorana |
| Stapelianthus madagascariensis | jirifo |
| Steganthus lanceus | vazanomby |
| Stellaria emirnensis | voananjananjana |
| Stenochlaena tenuifolia | ampanganamalona |
| Stenocline ericoides | mahaibe |
| Stenotaphrum dimidiatum | ahipisaka |
| Stephanodaphne cremostachya | soahazo |
| Stephanostegia brevis | hazondronono, merompotsy, tambonana, valotra |
| Stephanotis floribunda | belataky, bokabe |
| Sterculia tavia | afotrakora, afotrakoramena, hafontrakora, hafotrakora, hafotrakoramena, tamenaka, tavia, tavy |
| Stereospermum arcuatum | fangalitra, kininala, manafangalitra, mangarahara |
| Stoebe cryptophylla | anjavidivavy, lesikondana |
| Streptocarpus hilsenbergii | sanganakoholoko, tsimbolaotra |
| Strobilanthes madagascariensis | belohalika |
| Strongylodon madagascariensis | vahimaitsiamboditsimo |
| Strychnopsis thouarsii | amboramaitso, hazontalaka, telotritry, titeliravina, vodihazo |
| Strychnos baronii | pandela |
| Suregada adenophora | kalavelo |
| Symphonia | azinina |
| Symphytosiphon perrieri | remaitso |
| Syzygium aromaticum | jirofo, jorofo, karafoy |
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